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JGI Hosts GPU Hackathon in May
… high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility … Office of Science user facility, aims to explore applications in the life sciences that can be ported to the GPU architecture. A GPU hackathon is a five-day coding event that offers participating …
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When “The Blob” Made It Hotter Under the Water
… marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A team of … ocean known as “The Blob.” The event was recorded during a long-term study of microbial communities in the northeastern … in the ocean drive the biological pump that takes carbon from the atmosphere and keeps it in the deep ocean. With …
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Supercharging SIP in the Fungal Hyphosphere
… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with … a particular fungi, researchers identified novel interactions between bacteria and the fungi. The Impact Stable …
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Alabama A&M Interns Access An Abundance of Knowledge
DOE RENEW initiative, undergraduate student Ti’Yanna Watson and graduate student LaMonika Dent worked with JGI mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver water and nutrients. In order to do …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, photosynthetic … important cold-water communities of algae with warm-adapted ones, a trend that threatens to destabilize the delicate … microscopic photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
As SIP experiments shed more light on microbial communities than ever before — especially with … work to create FAIR datasets to maximize returns on these advances. Over the last two decades, Stable Isotope … hundreds of stable isotope probing genome-resolved metagenomes and will be implementing new tools in KBase to …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) co-hosted a … for access to multiple genomics and molecular characterization capabilities in just one research proposal. Guest speaker …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, 2020, a shelter-in-place order …
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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October 18, the production sequencing labs in Building 100 were silent. Twenty years … after the JGI united the genomics expertise of three national labs in one long building at Walnut Creek, after …
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Webinar: Introducing the BioSANS capability
… for Structural Molecular Biology (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted a webinar to …
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