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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & … Lab) hosted a pitch event promoting fully-supported summer research collaborations through the U.S. Department of … were: Simon Roux and Matthew Kellom for the JGI Metagenome Program Ellen Dow and Elisha Wood-Charlson for the …
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Three Join the JGI User Executive Committee
… (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest National … base, including both university and national laboratory researchers. This will help the JGI shape its programs, … Evolution and Marine Biology at UCSB, where she leads a research group investigating the physiology and evolution of …
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Rex Malmstrom
… is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … PNAS 113 (28), E4069-E4078 Bendall, M.L. et al. 2016. Genome-wide selective sweeps and gene-specific sweeps in …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
On September 1, JGI held a JGI Engagement: Pro Tips for … Science Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  New … file.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI Announces 2025 New Investigator Portfolio
Flavia Winck Vischi, Jennifer Wisecaver, Yaqi You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel research projects from PIs who have not led any previously …
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Introducing New Members of the JGI User Executive Committee
Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on … – go here to view the full roster of members. Each of the researchers had their own reasons for wishing to serve on … in mind. Microbiome ecologist Shade became Director of Research at France’s Centre National de la Recherche …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted the metabolomic analysis … to academic, government agency, non-profit, and industry researchers worldwide.  Q:  To what extent is natural soil a … (uM etc).  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Access to Rock Star Scientists
Cole, Mo Kaze, Akshay Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The students’ research culminated in presentations on their work delivered during the 5th anniversary …
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Krishna Palaniappan
Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … database to include a dedicated section for viruses, so researchers around the world would have better, easier …
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, functional annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data …
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Uri Neri
Uri Neri is a computational biologist who spends his days wrangling viral genomes and occasionally remembering to document his code. At JGI, he develops …
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