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… Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), and the Energy Sciences Network … award recognized the release of MetaHipMer, an end-to-end genome assembler that supports “an unprecedented assembly of … assembled for the first time with  MetaHipMer , taking advantage of scalable parallel algorithms and GPU acceleration, …

… possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by … by searching for Cas12d homologs across IMG/M’s assembled metagenomic data. It turned out that some of these were … system with its large collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around …

… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in …

… Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction to the …

… and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to …

… works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other organisms – …

… Repeats) is the leading tool for accurately editing genomes, its effectiveness has historically been limited due … CRAGE (Chassis-independent Recombinase-Assisted Genome Engineering) is a technique researchers can use to … users of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, as a species, encompasses dizzying diversity. …

… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … of DNA (up to 60 kb) in a single step, directly into the genome. “CRAGE is central to our ability to offer … of stable, synthetic microbial communities to take advantage of their joint metabolisms. Because, together, microbes …

… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots … turn boost yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office building, … of the key community participants and enabling future metagenomics studies.   …

… production of biofuels and renewable chemicals, developing genome engineering tools for non-model organisms, modulating …