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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
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Insights into convergent evolution of cosexuality in liverworts from the Marchantia quadrata genome
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Targeted genetic manipulation and yeast-like evolutionary genomics in the green alga Auxenochlorella
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the bench to … has closed at the U.S. Department of Energy (DOE) Joint Genome Institute, a DOE Office of Science User … and Identification of Mitochondrial Plasmids from DNA Sequence Moitrish Majumdar Mentors: Bikash Shrestha, Crysten …
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2025 NeLLi Symposium
… students and postdocs): $250      Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… Three stories of JGI-supported research, connected to nutrient cycles. … Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass … on the symbiotic relationship between mycorrhizal fungi and plant roots.  …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes … genomes of uncultivated giant viruses from environmental sequences across the globe, then using these sequences to …
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Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa
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A High‐Throughput Investigation of the Binding Specificity of Carbohydrate‐Binding Modules for Synthetic and Natural Polymers
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Microbial methane production from calcium carbonate at moderately alkaline pH
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … ecosystems all over the world, including 3,908 isolate reference DNA viruses and 264,413 computationally identified …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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