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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 participants in an online workshop to …
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Green Algae Reveal One mRNA Encodes Many Proteins
Gene expression in eukaryotes was long held to be monocistronic – that is, a single gene makes messenger RNA, which encodes a single protein. Gene expression in eukaryotes was long held to be …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing conditions. A recent study shows that when salinity is … melt pools, and within the water column. They are also the primary producers in the marine food web, forming the base …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for … Automated Laboratories: Integrating Experimentation with Data.” The event will take place at the Seattle … This three-day joint user meeting will feature insightful presentations, dynamic panel discussions, informative poster …
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JGI Launches Latest Strategic Plan
Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide … to begin a month later. In parallel with the intricate move preparations, the JGI has released its newest 5-Year …
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Busting the Unbreakable Lignin
… shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to … and lignin, cumulatively called lignocellulose, are the primary components of hardy cell walls. It’s the cellulose and …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how ecosystems …
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Crysten Blaby-Haas
University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging molecular biology and reverse …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… greenhouse gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … therefore play a critical role in the global carbon cycle, and are of significant interest for their …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential …
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Gene Expression: From On-Off Switch to Dial
Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science … a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to the traditional way, …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. … what these viruses can do. Building on existing virus-host prediction approaches, researchers have created a new …
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