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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school … cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … final paper that  could be published. Watching 18 students working to create a paper simultaneously in the same …
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What Happens Underground Influences Global Nutrient Cycles
… projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of … Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for … influences the soil microbiome and biochemical reaction networks, and also assessing the role of viruses in the soil …
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First Monoploid Reference Sequence of Sugarcane
… Sorghum genome serves as a reference for the highly complex … Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple … Research Centre for International Development (CIRAD), who worked on sequencing and assembling fragments of sugarcane …
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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Katherine Louie
… became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts … of a strong core foundation of robust mass spectrometry workflows for polar and nonpolar metabolite analysis, … profiling over 10k samples/year, Dr. Louie and her team work with other JGI scientists in development of new, …
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Crops as Tough as World Cup Turf
… need corn, sorghum and other crops to grow well in worse conditions: with more heat, less water and less fertilizer. Grasses do better in these conditions, so plant biologists James Schable, Guangchao Sun …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… Three stories of JGI-supported research, connected to nutrient cycles. Francis Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison Joy looks into …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … methane production to confirm that indeed, they were. The work was enabled in part by working with both the JGI and …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for … The Science Since its launch 25 years ago, the  Genomes OnLine Database has matured from six projects on a … and reliable manner. The JGI team managing GOLD already works closely with two other DOE-funded projects — the …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale postdoctoral … the JGI-NERSC Engagement Lead with a focus on adapting JGI workloads to run on supercomputing hardware and worked … Informatics Officer provides advice and strategic direction for the overall design and implementation of …
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