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Natural Prodcast Episode 21: Elizabeth Parkinson
… it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. … quorum sensing and its effects on regulation of natural product biosynthetic pathways, which led her to a successfully … I'm older, but-- [LAUGHS] I feel like a lot of people hedge their way into natural products by starting out in synthesis …
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JGI Launches Latest Strategic Plan
Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data … of the Integrative Genomics Building—the new home of the JGI and KBase in the heart of the Lab’s 200-acre campus—with …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … to living on a changing planet. In this short audio production, we’ll hear from Karolina Heyduk, an evolutionary … work. KAROLINA:  We all know plants take up water through their roots. But for them to be able to pull that water …
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JGI Workshops at PAG
The purpose of this Workshop is to illustrate the expansion of this field and bring it to the attention of the wider genomics community. Jan. 13 workshop: BER … we will present current and ongoing developments at the JGI and KBase toward integrative biology and hear from …
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Nick Everson
Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include … and at the Lawrence Livermore National Laboratory.   … MBA, UC Berkeley-Haas School of Business BS in Business …
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Microbial communities of the Laurentian Great Lakes reflect connectivity and local biogeochemistry
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JGI Hosts GPU Hackathon in May
… high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility … opportunity to either jumpstart acceleration or optimize their code on GPUs. While the  OLCF is organizing nearly a … of on simulation codes. “JGI is one of the largest producers of environmental genomics data and has a strong …
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Natural Prodcast Episode 8: Eric Schmidt
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for … student. Aflatoxin, of course, is a fungal natural product which is a liver toxin when humans accidentally eat it, … about sponges, can you maybe explain what’s going on with their biology and why they’re so important to natural …
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The Sphagnome Project: enabling ecological and evolutionary insights through a genus‐level sequencing project
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … which started in 2012, and what they’ve discovered through their collaborations. One review article in the collection, … plants. To better pinpoint the biosynthetic routes that produce terpenes, the JGI synthesized several of the underlying …
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JGI & KBase at PAG XXVII
The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San … Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will … systems that make use of these resources will present on their work. BER Plant Genomic Science Workshop Agenda: 6:20 …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural microbial … making quantitative measurements that answer questions such as, “who is eating what?” and “who is active? … The JGI … specific uncultivated microbes for sequencing based on their level of metabolic activity (BONCAT+FACS). To provide …
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