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From Competition to Cooperation
… with plants (mycorrhizae), and particularly how fungi that feed on decaying plant matter (saprotrophs) have … allow host plants, such as candidate  bioenergy feedstock crops, to acquire nutrients. Additionally, these …
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Single Cell Research Group
… genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic potential … virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., … information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. …
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Natural Prodcast Episode 14: Nigel Mouncey
… in an obvious way. NIGEL MOUNCEY: We did a little bit of metagenome screening work and did find related clusters. But … fermentation process itself. And we built a nice modeling feedback loop for the fermentation work, which really … in the environment and how we might be able to take advantage of those to improve plant health, for example.  DAN: …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… water column. They are also the primary producers in the marine food web, forming the base of the food chain and providing energy for a slew of marine organisms, as well as contributing to nutrient …
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Three Join the JGI User Executive Committee
Professor in the Department of Ecology, Evolution and Marine Biology at UCSB, where she leads a research group … and the JGI-EMSL FICUS programs and brings expertise in metagenomics and novel applications for long-read DNA … a breadth of institutions, research topics and career stages. The election period concluded on January 8, 2024. …
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Enhancing microRNA167A expression in seed decreases the α‐linolenic acid content and increases seed size in Camelina sativa
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Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended
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Rex Malmstrom
His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … not be possible with traditional approaches. … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in … et al. 2024.  Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis. Nature Plants …
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Tapping the treasure trove of atypical phages
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Insights into the Effects of Long-Term Artificial Selection on Seed Size in Maize
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Zng1 is a GTP-dependent zinc transferase needed for activation of methionine aminopeptidase
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User Support
… meetings with DOE JGI Science Program leads Solicit user feedback about your overall experience working with the JGI. …
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