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Ben Bowen
… BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab … Northen, T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and metabolite …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … actually tested in the 2011 paper. In 2015, the study’s dataset became material for a hands-on undergraduate …
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Frederik Schulz
… Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and … insights into the diversity and important ecological roles of microeukaryotes in terrestrial ecosystems. Additionally, …
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Analyze Data
… The JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work with our partners to build infrastructure in support of new analysis techniques.  … Chief Informatics Officer …
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The More the Merrier: Making the Case for Plant Pan-genomes
… plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … genomes to a diploid state while retaining multiple copies of some genes. This polyploidization process is ongoing and … quality genome assemblies for all three grasses. With these datasets, researchers made a pan-genome containing four  B. …
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … the collective power of more than 26,000 microbiome datasets, all accessible through the publicly available  … Protein Families (NMPF) Catalog.  “We can now analyze new datasets by comparing against these protein families, or …
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Tour the IGB
… Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, click and drag to look around the space, use …
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Massively parallel sequencing identifies the gene Megf8 with ENU-induced mutation causing heterotaxy
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in … Center (Danforth Center) drove up and down the highways of the continental United States, occasionally pulling over to the side of the road to collect small weedy plants and bring them … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Natural Prodcast
… about natural products and the science and scientists of secondary metabolism. Natural products, secondary … research, “Natural Prodcast” serves as an important line of communication to the scientific community. Host Dan … and future developments, and how the JGI can be part of that space.   …
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … on cotton production, and the crop’s annual economic impact of $500 billion worldwide underscores its value and importance in the fabric of our lives. In the United States, cotton production …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … The webinar featured  Trent Northen and Ben Bowen of the  JGI Metabolomics Program , along with Jenny … environmental or biological samples (like cell media or lake water) without doing a metabolite extraction? Or are …
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