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The Power of One, Amplified
… showed that single cell genomics can add significant value to the other commonly used culture-independent sequencing approaches including amplicon and metagenomic … Sciences and Energy Research Council of Canada (NSERC) Discovery Grant to PFD (2019-06265). This work was also …
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Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
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Population genomics of picophytoplankton unveils novel chromosome hypervariability
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Manipulating the 3D organization of the largest synthetic yeast chromosome
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired … in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … 4th year PhD student in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has …
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once … and viruses vastly outnumber the microbes. Advances in sequencing technologies and computational tools have … said Simon Roux , a JGI scientist and one of the project co-leads. “But same as DNA viruses, RNA viruses infect microbes …
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Publication Policy
… result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …
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The Genome of Nectria haematococca: Contribution of Supernumerary Chromosomes to Gene Expansion
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Viral Genomics Group
… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … involves both experimental and computational exploration of uncultivated viral diversity, characterization of … and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The …
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Streamlining Regulon Identification in Bacteria
… technology could speed up associating transcription factors with their target genes. The Science Regulons are a … of regulon identification by in vitro transcription-sequencing (RIViT-seq) to facilitate the characterization of … JGI’s Secondary Metabolite Science Program, which Mouncey leads. RIViT-seq is a three-step process. The first step is …
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Chromosome evolution and the genetic basis of agronomically important traits in greater yam
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