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… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE … virus dynamics and functional potential ," is among the five focused on tool development. Specifically, the goal of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… Originally conceived as a UC Merced graduate student summer … than 90 UC Merced students have contributed to the research of numerous JGI scientists. Interns say their experiences allowed them to:  Learn new skills. Experience industry-level work and coding. …   Revisit past projects …

… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … that in this symbiosis going back hundreds of millions of years, accidental gene swaps via horizontal gene transfer …

… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … this way was challenging, according to Martin. “Twelve years ago, when we mapped the first sequenced RNA from the …

… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how … to technical limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification … broccoli and trees like poplar, spanning about 150 million years of evolution,” said Leo Baumgart, first author on the …

… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … metabolisms Of the 10 MAGs reconstructed in the study, five were from undersampled or previously undescribed … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… shared their works-in-progress with 86 participants in an online workshop to harness deep learning for metagenomic … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … using HMM profiles of protein domains from the pfam database to test the efficacy of a particular kind of deep …