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An Integrative Computational Approach for Prioritization of Genomic Variants
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MicrobesOnline: an integrated portal for comparative and functional genomics
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers … of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … datasets, all accessible through the publicly available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, …
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Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.)
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Kjiersten Fagnan
… and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … Dr. Fagnan was on the organizing committees for the ASCR Integrated Research Infrastructure - Architecture Blueprint …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … leaves, a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … you can think about.   DAN: What kind of genomic resources are available these days for the natural product … This is episode 4 of Natural Prodcast, our interview with Dr Nancy Keller from …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their … Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research … primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed …
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Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … portals and tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for …
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The GreenCut2 Resource, a Phylogenomically Derived Inventory of Proteins Specific to the Plant Lineage*
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