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Clarence Le
… and analyzes novel clades of RNA viruses and determines novel viral gene functions that may impact hosts and host populations. …
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Finding the Fermenters
… including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … at the University of California, Davis and UC Santa Barbara generated a list of prokaryotes with fermentative metabolism … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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Comparative genomics of Rhizophagus irregularis, R. cerebriforme, R. diaphanus and Gigaspora rosea highlights specific genetic features in Glomeromycotina
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the … tool called geNomad that identifies and classifies mobile genetic elements based upon their gene content and their …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 … to a new appreciation for the extent of diversity. The phylogenetic and functional characterization of this novel … University of Delaware Eunsoo Kim, American Museum of Natural History Roland Hatzenpichler, Montana State …
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You Can Move, But You Can’t Hide
… develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science … Lead Nikos Kyrpides at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … cellular level, scientists can better understand ecosystem-wide processes. Summary geNomad is an annotation and …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — …
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A 34K SNP genotyping array for Populus trichocarpa: Design, application to the study of natural populations and transferability to other Populus species
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A vast collection of microbial genes that are toxic to bacteria
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have … year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the green …
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Daniel Udwary
… for JGI’s Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene clusters in bacteria and fungi. Prior to joining the … (1996) … List available on Google Scholar … Education … Publications …
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern … event that occured some 60 million years ago. Massive gene loss, rampant gene duplications, and even more ancient … fern’s distant cousin. Ceratopteris richardii, or C-fern, specifically has been studied in plant research laboratories …
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