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… been able to study both sides of this interaction up close, using RNA sequencing to understand gene expression: one of … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … to look at gene expression in both plant cells and fungal cells. Using a technique called single nuclei RNA …

… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial and archaeal … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

… and development of high-throughput untargeted analysis pipelines.  Beyond profiling over 10k samples/year, Dr. … metabolomics with genomic data (MAGI) for functional annotation and identifying unknown compounds (Pactolus). … … Sci Rep. 2013;3: 1656. … Education … Selected Publications …

… more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The Impact Secondary metabolites … and viral BGC sequences. Expansion of the SMC to include fungal, plant, viral, and metagenome data is currently …