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A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data
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Next generation sequencing data of a defined microbial mock community
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IMG/M: integrated genome and metagenome comparative data analysis system
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MetaHCR: a web-enabled metagenome data management system for hydrocarbon resources
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Obtaining Comparative Genomic Data with the VISTA Family of Computational Tools
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A k-mer-based approach for phylogenetic classification of taxa in environmental genomic data.
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their … Facility. Grigoriev and his team at the JGI contributed to annotation of the genomes, available online at  PhycoCosm (for the alga genome) and  MycoCosm … was supported by an intramural seed grant (IGSP 2008001) to DA, FL, and FD from the Duke Institute of Genomic …
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Genome Insider
… The Genome Insider podcast brings listeners into the science that the JGI makes possible. Each episode, … Wilhelm interviews researchers — JGI Users — and dives into their work on all kinds of organisms, from plants and fungi to microbes and viruses. Listen in to explore the data that illuminates biology, and hear how it could power …
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Soil virus offers insight into maintaining microorganisms
… portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative … suite is a community resource for comparative analysis and annotation of all publicly available genomes in three … science FICUS initiative, which allows researchers to access capabilities of the JGI and the Environmental …
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Game On: High School Students Drive Everglades Metagenomics Study
… Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about … to the body of scientific knowledge that can be accessed by the rest of the community. These high school …
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Genome‐wide associations with flowering time in switchgrass using exome‐capture sequencing data
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The BioMart community portal: an innovative alternative to large, centralized data repositories
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