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Metagenome-Assembled Genomes from a Microbiome Converting Xylose to Medium-Chain Carboxylic Acids
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New insights from uncultivated genomes of the global human gut microbiome
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Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint … for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide … processed 13,700 metabolomics samples With our users, 247 publications were published   …
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Comparative Genomics Using the Integrated Microbial Genomes and Microbiomes (IMG/M) System: A Deinococcus Use Case
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine … The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  …
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Tetranucleotide frequencies differentiate genomic boundaries and metabolic strategies across environmental microbiomes.
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A framework for human microbiome research
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Getting to the core of the gut microbiome
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A blueprint for contemporary studies of microbiomes
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of … higher education that develops skills in fungal biology and genomics.  Myco-Ed :  The Mycological Curriculum for … MycoEd receives organizational and developmental support from KBase (The …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  … fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is collaborating … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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