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The Biota Project: A Case Study of a Multimedia, Grassroots Approach to Scientific Communication for Engaging Diverse Audiences.
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A second special issue of Standards In Genomic Sciences from the Genomic Standards Consortium
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … challenges, characterizing viruses is a key step. For decades, though, many viruses have been somewhat … easier access to these viral genomes. The new database was called IMG/VR. It featured samples from different ecosystems …
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Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … biology. The collaborations present exciting possibilities for scientific exploration, granting access to diverse … Through its partnership with NERSC and the DOE Energy Sciences Network …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Sequencing technology has changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … address some of the most pressing challenges of our time. For more information, please visit  …
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JGI announces 2025 Functional Genomics awardees
… [ Pictured from left: [Above] Hao Chen, Matthew Cope-Arguello, Theophilus Olufemi … Benjamin Woolston. ] Each year, the JGI accepts proposals for state-of-the-art functional genomics research from … biological function. Through our  CSP Functional Genomics call , we look for projects that will leverage the JGI's DNA …
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Genome-based classification of micromonosporae with a focus on their biotechnological and ecological potential
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A Standardized Synthetic Eucalyptus Transcription Factor and Promoter Panel for Re-engineering Secondary Cell Wall Regulation in Biomass and Bioenergy Crops
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately … and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in … software tool  recently described in  Nature Biotechnology  called geNomad identifies and classifies MGEs based upon …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of … the team. These strains have been characterized physiologically and enzymatically, with descriptions of how their … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar … data set will help identify how different elements of the ecosystem interact and respond to changes in the … This research was sponsored by the U.S. Department of Energy, Office …
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