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GLO-Roots: an imaging platform enabling multidimensional characterization of soil-grown root systems
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … it, viruses are most likely in your system and in your data, and they’re probably influencing the microbes there,” … challenges, characterizing viruses is a key step. For decades, though, many viruses have been somewhat …
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Uncovering Novel Genomes from Earth’s Microbiomes
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications.   … under laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and … and research scientist in Nikos Kyrpides’  Microbiome Data Science group. “What makes this study really stand out …
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Introducing New Members of the JGI User Executive Committee
The JGI welcomes three new members to their User Executive … of members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist … in access, analysis and sharing of JGI-generated data. She is also interested in reaching and engaging with …
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Graduate Students Get Thesis Research Opportunity at the JGI
SCGSR award is Mo Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of … to answer our most pressing problems. I’m very much looking forward to working with JGI and LBNL scientists and have … to work with JGI virus researchers and harness the IMG/VR database. “The SCGSR award will further my goal of resolving …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … States. They also provided multiple access points to the information. The team harnessed a community-science program to … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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Next generation sequencing data of a defined microbial mock community
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JGI Welcomes New UEC Members
The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices … JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve three-year terms and …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group …
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