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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm portal . …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Phytozome and will be available for future single-cell projects.” The Berkeley Lab  Biosciences Area has been …
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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … technology in order to enhance the quality of single-cell genomes and directly link functional information with … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …
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THE Bioenergy Tree
The US Department of Energy’s favorite tree is poplar. They’re the fastest growing trees in the Northern Hemisphere, making them … remarkable genetic secrets that bring us closer to making poplar an economical and sustainable source of energy and …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal … lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … of plant-host and mycorrhizal-fungal interactions. … The project was funded by the U.S. Department of Energy Joint …
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David Goodstein
With a background in experimental and computational surface physics, Dr. … gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic …
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High Throughput Phosphoglycolate Phosphatase Activity Assay Using Crude Leaf Extract and Recombinant Enzyme to Determine Kinetic Parameters Km and Vmax Using a Microplate Reader
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … A., Hadjithomas M., Varghese N. J., Paez-Espino D., Hungate project, collaborators Perry R., Henderson G., Creevey C. …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy Spencer Chair in Genomics at the … City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) … and multidisciplinary nature of DOE mission science projects, this initiative aims to encourage innovative … and selection processes, making it difficult to propose projects that truly integrated the capabilities of more than …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), … partnership had become a “model” of sorts at the Lab. “This project represents part of our long term efforts to …
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