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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… and viruses vastly outnumber the microbes. Advances in sequencing technologies and computational tools have … This is also the type of synergistic and collaborative community spirit that the JGI advocates for and actively … system. “We then looked into many more samples and refined our methodology,” Neri said. “Our team grew and so did the …
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How Filamentous Fungi Sense Food
… importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … (Berkeley Lab). The work was enabled in part through JGI’s Community Science Program through a proposal akin to the … a Joint Genome Institute Community Science Program grant (CSP 982), and funds from the Fred E. Dickinson Chair of Wood …
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Tracing the Evolution of Shiitake Mushrooms
… mushrooms get their name from the same place they often source their nutrients — the shii tree, a Japanese relative … Genome and transcriptome sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome …
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Operating Expenses
Office of Biological and Environmental Research (BER), a program within the DOE Office of Science. …
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Uncovering Novel Genomes from Earth’s Microbiomes
… environmental samples  sequenced by the JGI through the  Community Science Program and was already available on the … Path for Metagenomics Researchers Building upon these resources, KBase, a multi-institutional collaborative knowledge … hope JGI and other institutions continue to do this kind of projects.” The work also used resources of the  National …
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User Executive Committee
The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices … user meeting. The UEC also acts as a liaison to the user community and the broader scientific community, and promotes …
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10 From JGI on the 2019 Highly Cited Researchers List
… , Biology & Biochemistry category Some highlights from projects each of these researchers were involved in that … last year: Kerrie Barry and Jeremy Schmutz worked with a community of switchgrass researchers to conduct a … for an uncultivated virus genome, including the source, methods of identification of the virus genome, and …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … effective in organizing, training and deploying hundreds of community members in their neighborhoods and nearby forests … Laboratory SOD Blitz Project SODmap Mobile Oak SOD Testing Program (OakSTeP) California Oak Mortality Taskforce   …
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Microbiome Data Science: Understanding Our Microbial Planet
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The Impact of Genome Analyses on Our Understanding of Ammonia-Oxidizing Bacteria*
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Graduate Students Get Thesis Research Opportunity at the JGI
… between 3-12 consecutive months. Their proposed research projects address scientific challenges central to Office of … are developing cutting edge technologies to answer our most pressing problems. I’m very much looking forward to … samples across spatial and temporal scales. Rambo also plans to work with JGI virus researchers and harness the …
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Katherine Louie
Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics …
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