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Trent Northen
… the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … Northen is the Metabolomics Science Program Head at the JGI. Click to learn more about the program's areas of focus, …
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FICUS-NERSC/KBASE
… expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … as part of the FICUS initiative. Proposals submitted to the JGI-NERSC-KBase call do not use the Letter of Intent; rather … review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating …
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A Social Science Experience
… 2017 Summer Interns Share Highlights of their time at the JGI …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization …
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An Integrated Dataset to Understand Ecosystem Interaction
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The work builds off a longstanding partnership between the JGI and Oak Ridge National Laboratory, dating back to the … and DE-AC05-76RL01830 (PNNL). … BioScales project on JGI Genomes Online Database … BioScales project on National …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … improved varieties for biomass production. He did his postdoctoral studies at the Carnegie Institution for Science …  https://doi.org/10.1111/nph.15662 Gordon, et. al. 2017 Extensive gene content variation in the Brachypodium …
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Igor Grigoriev
… the DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and work in the … genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 … life.  Nature Microbiol. 3(12):1417-1428. Haitjema et al (2017) A parts list for fungal cellulosomes revealed by …
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2024 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … users to leverage biological and biochemical functions to meet climate and energy goals, improve food security and … have organized, chaired sessions, presented and attended meetings around the world to showcase the JGI’s science and …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the … Ul-Hasan noted. “I spent a good portion of 2016 and all of 2017 looking for  C. californicus across the California-Baja … Associated Microbes and Parasites. Ul-Hasan credits her JGI-UC Merced summer internship for helping lay the …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users to develop … requested information or resources to users Coordinate meetings with DOE JGI Science Program leads Solicit user …
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CSP Functional Genomics
… function.  The emphasis is on projects leveraging JGI’s DNA synthesis and ‘omics capabilities to enhance … without the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at any time using a simple web-based form and are …
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Informatics Advisory Committee
The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is chartered to render advice, … the effective management and strategic objectives for the JGI’s data science, informatics and information technology …
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