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Natural Prodcast Episode 15: Katherine Duncan
… inside them. And this was, I think it must’ve been about 2001, maybe, and so it was before smartphones and before … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you … send us a question that we might play on air, email us at JGI-comms. That’s JGI dash C-O-M-M-S @ lbl.gov . And, …
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2024 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … in our new Strategic Plan , which was released in April 2024 — through serving an increased number of users with a … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to …
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Plant-Microbial Interactions Group
… patterns in root cross-sections. … 10.1038/s41579-020-0381-4 10.1038/s41396-020-0637-z … 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE …
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Synthesis
… assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate … develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program.    Representative software … and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year Strategic Plan: … Serve the Changing Planet (download a copy at jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of …
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Metagenome Program
… viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative … analysis through the IMG/M platform. Further, the JGI partners with the National Microbiome Data Collaborative …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 Nature paper announcing a high-quality reference …
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An Integrated Dataset to Understand Ecosystem Interaction
… processes for the first time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The work builds off a longstanding partnership between the JGI and Oak Ridge National Laboratory, dating back to the …
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User Executive Committee Charter
The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their …
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Natural Prodcast Episode 20: Brian Bachmann
… went on to work at a groundbreaking company in the early 2000s called Ecopia, which was a very early genome mining … you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more to talk about there, and …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American … and functionally explore viral genetic diversity.  In 2021, he was among those selected by the DOE Office of …
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