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The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, …

A collaborative team led by Geoffrey Schiebinger at the University of British … the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in … Phytozome and will be available for future single-cell projects.” The Berkeley Lab  Biosciences Area has been …

For the first time in several years, the DOE Joint Genome Institute hosted … and their JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and … Study of Root Colonization by Resident Phages of a Plant Growth Promoting Rhizobacterium Graduate Interns Tahirah …

More than 20 UC Merced students have contributed to the … teamed with University of California (UC), Merced assistant professor Suzanne Sindi from the School of Natural … shared their thoughts on the students’ efforts. Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial …

… research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating … Terpenes are made via a tangled network of enzymes in plants. To better pinpoint the biosynthetic routes that … in five years, have come out of the JGI-supported project. “The JGI DNA Synthesis Science Program has been …

Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the … private sector, as well as research expertise in secondary metabolites and synthetic biology. Dr. Mouncey has a … et al. 2021. Tiny Earth: A Big Idea for STEM Education and Antibiotic Discovery. mBio. 12:e03432-20 Wood-Charlson EM et …

… the JGI develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The … and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found … used computational resources from the Exascale Computing Project (17-SC-20-SC), a collaborative effort of the U.S. …

The 11th cohort of JGI-UC Merced interns pick highlights from their summer … and also made new friends while working on their summer projects. Watch the short video here to see what they had to … learned so much in terms of scientific approach and as a plant biologist, I have learned so many techniques and theory. …

… of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a look back at the … from its beginnings in the sequencing for the Human Genome Project out to the future of the institution. Their talks … Todd Anderson currently works to support understanding of plants, microbes and environmental communities that have …

… 2023 marked a decade since the inception of the flagship … partnership had become a “model” of sorts at the Lab. “This project represents part of our long term efforts to … replicate.”  On the other side, UC Merced Senior Assistant Dean and CFO of the School of Natural Sciences Ernie …

Machine learning methods were applied on sequenced fungal … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact … from decaying organic matter (saprobes), and many plant pathogens known to infect most major food crops and …