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Plant Microbial Interactions Group
… Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host metabolism, gene … approach, we employ various omics technologies, strain engineering and experimental characterization … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
…   The JGI is excited to announce the 18 scientists selected for … CSP investigators,” said Tanja Woyke, Deputy Director of JGI’s User Programs. “Many of these projects are large in … Of these 18 scientists, eight have never been involved in a JGI proposal. Three are previous collaborators, though have …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Lauren Stadler, Tingting Xiang and Sheree Yao. ] ] The JGI welcomed 14 scientists selected for our 2026 Community … (NMDC) to produce open metagenomics data. Taking the JGI’s call for large-scale projects at their word, the … that span disciplines and scales,” said Tanja Woyke , the JGI’s User Programs Deputy. “These proposals highlight the …
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Natural Prodcast Episode 11: Marnix Medema
… on Streptomyces clavuligerus , which was an industrial strain, a Streptomyces strain, the bacterium, that had been … gene clusters. And I had heard the first rumors of people sequencing like these enormous numbers of genomes, like 20 … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …
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Natural Prodcast Episode 15: Katherine Duncan
… before– or kind of around about when the first genome sequencing was done. But natural products– marine natural … And we’ve given them genome sequences of some of these strains. They’re not all Pseudonocardia . There’s other very … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
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User Support Analysis Group
… computational analysis for new technology development and JGI user science projects. We perform analysis for diverse … development of automated analysis pipelines for standard sequencing products performed at scale. Our group also …
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Natural Prodcast Episode 9: Roger Linington
… let me know! I’m dying to hear from you. Toss an email to  jgi[email protected] , or leave us a review on Apple Podcasts … all this sort of stuff. So I think there is a huge opportunity there. But it requires developments on the … us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …
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Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of … Do you accept oomycetes to be proposed for genome sequencing, or only “true fungi”? A(nswer): Our focus is on … credit to the sample provider who are doing the sampling, strain isolation, RNA/DNA extractions and quantifications, …
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An Integrated Dataset to Understand Ecosystem Interaction
… generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization were provided by … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The work builds off a longstanding partnership between the JGI and Oak Ridge National Laboratory, dating back to the …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated Bioimaging (MBIB) … user facilities at Berkeley Lab. Commenting on the visit, JGI Director Nigel Mouncey expressed enthusiasm about the … expertise of the involved institutions will give us the opportunity to advance unique scientific knowledge and …
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Selection to sequence: opportunities in fungal genomics
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