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Phototrophic Co-cultures From Extreme Environments: Community Structure and Potential Value for Fundamental and Applied Research
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Webinar: MycoCosm Tutorial
… or only “true fungi”? A(nswer): Our focus is on fungi, algae, plants, and the microbial world but we also annotated … in metagenomes? A: Search in metagenomes is available from another JGI portal, IMG:  https://img.jgi.doe.gov 7.  … 10.  Q: Is there any possibility to search for genes/proteins by their commonly used names in publications? …
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JGI announces second round of 2023 New Investigator awardees
… From left to right: [above] Emma Bell, Mallory Choudoir, … is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel … not led any previously-accepted proposals — through the New Investigator call under our Community Science Program .  …
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What Happens Underground Influences Global Nutrient Cycles
… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … Institute (JGI)—have selected 11 proposals for support from 53 received through a joint research call. Submitted … and discover gene functions that may be relevant to both algae and land plants.  Within the biogeochemistry group, …
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Understanding Wildfire Recovery, Starting in Soil
… across a spectrum of burned soils. By connecting microbial genes with functions useful for forest recovery, this study … team of researchers collected soil samples from a wildfire that burned at the Colorado-Wyoming border, … burn severities look like a year after a fire. It also opens questions about what the soil microbiome looks like …
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New insights from uncultivated genomes of the global human gut microbiome
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Enlarging Windows into Understanding Gene Functions
… connections between the structures and functions of the genes encoded in the genome sequence is part of the … The technology expresses the transcription factor proteins from a DNA template amplified directly from either genomic … factors have been repurposed during evolution to control new functions,” O’Malley said. “Combining the two approaches …
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JGI announces first round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools … for novel research projects — aligned with DOE missions and from PIs who have not led any previously-accepted proposals —  through the  New Investigator call under our Community Science Program.  …
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A microarray for assessing transcription from pelagic marine microbial taxa
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds in the … resource that provides information at multiple scales from genes to the community level. The Impact Rivers are …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at … (that is, repair gene mutations, and either delete or add genes in a precise fashion) has applications across many … from infecting viruses and phages. In the event of a new infection, the microbes use the genetic information …
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