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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … on cotton production, and the crop’s annual economic impact of $500 billion worldwide underscores its value and … for all this new cotton work, and even the original cotton project was to try to bring in molecular methods of breeding …
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User Programs
… and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of … CLOSED Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of …
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A User-Centered Approach to Accessing JGI Data
… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering … limited to: Public data: datasets associated with completed projects that are eligible for public release, have …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … First and foremost, our interview this week is with Professor Brian Bachmann from Vanderbilt University’s … we also worked in DIANs. We worked on that. We had separate projects with John Thorson and Ben Shen. [Listen here to Ben …
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Phylogenetically distinct fungal expansins show different binding preferences towards cellulosic materials and enhance cellulase activity
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in … Center (Danforth Center) drove up and down the highways of the continental United States, occasionally pulling over … JGI group has been wonderful to collaborate with, and this [project] wouldn’t have been possible without their …
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Improving the Cacao Genome and Phytozome
… fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is collaborating … Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the plant team …
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … and manufacturing. Genomic science lies at the heart of biology, providing the foundational knowledge to … and bioproducts: JGI user research advances understanding of biological processes that enable cost-effective energy …
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Science Programs
… The JGI’s Science Programs offer support to users and their research efforts.  JGI … lend their expertise to enhance the scientific impact of user projects, develop cutting-edge approaches for and with … Deputy of Science Programs …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and … in his science. And he was working with some really cool projects at that time. So I was pretty stoked to be able to …
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Understanding Wildfire Recovery, Starting in Soil
… begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … This study, published in Nature Microbiology , went a step further, using both DNA and messenger RNA (mRNA) sequencing … DOE Office of Science National User Facilities in a single project. …
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First Monoploid Reference Sequence of Sugarcane
… . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many … be crushed to extract the sugar-laden juice that can be further purified to produce alternative biofuels. A C4 plant … The JGI sequenced half of the 4,500 BACs sequenced for this project that were colinear to the gene-rich part of sorghum …
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