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With a background in experimental and computational surface physics, Dr. Goodstein held positions at … gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic …

Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing and comparative … Science  356: 82-85 Ovchinnikov S. et al. (2017) Protein structure determination using metagenome sequence …

… other forms of  Chloroflexota that adapted to marine environments hundreds of millions of years ago.  The Impact … structures that enable organisms to swim around. However, genome and metagenomic sequencing conducted by the U.S. … was done under Contract DE-AC52-07NA2734. Funding for this project was provided by the U.S. National Science Foundation …

The chromosome-scale genome sequence of trifoliate orange yields clues to … never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  … leaves, a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) …

To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha … the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research … experimental conditions, tissue types, and analytical protocols that permit gene expression analysis across plants …

This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last … the specialized software and supercomputers behind this project. But every part of this project depends on lakewater …

The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in … and multidisciplinary nature of DOE mission science projects, this initiative aims to encourage innovative … and selection processes, making it difficult to propose projects that truly integrated the capabilities of more than …