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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … also processed using the JGI-developed software suite, BBTools , and relying on the JGI Integrated Microbial Genomes … Processes and Ecology and the Daniel K. Inouye Center for Microbial Oceanography: Research and Education. …
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10 From JGI on the 2019 Highly Cited Researchers List
… Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly … Animal Science and Molecular Biology & Genetics categories Microbial Systems research group lead and User Programs … on an updated reference genome for Theobroma cacao, the tree that produces cacao beans. The improved cacao genome is …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Webinar: PhycoCosm Tutorial
… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would your Tree ever differ from NCBI Taxonomy? A(nswer): If you find … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Data Policy & Support
… Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last … through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October 18, the … labs in Building 100 were silent. Twenty years after the JGI united the genomics expertise of three national labs in … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Partnerships: Myco-Ed
… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques and data analyses compile … Beyond providing a scalable solution for production of high-quality fungal reference genomes, this program is an …
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JGI announces 2024 New Investigator portfolio
… The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel … of desert grasslands to the metabolic savviness of microbial ecosystems at the forest floor and along ocean …
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Supporting Global Research into Actinomycetes
… understanding of the bacteria potentially holds the key to discovering new antiviral medicines and treatments for … and the focus of a  recent paper published in  Microbial Genomics .   “Studying actinomyces, especially … other related organisms, requires using more specialized tools, skills and protocols,” explained Hiroshi Otani, an …
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Decoding Yellowstone’s Microbial Mats
… Life as we know it wouldn’t exist without cyanobacteria; … began oxygenating Earth over two billion years ago. A team of researchers set out to Yellowstone National Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered …
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