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A Collaboration to Improve Plant Genome Annotations Across Species
… the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which … improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … two species, one of which is sweet sorghum Rio from a JGI Community Science Program project and another is Lupinus …
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New Research Sheds Light on Diversity in the Deep Sea
… seeps through cracks in the Earth’s crust and reacts with very hot rocks below, becoming an extremely hot, … — influence the makeup and functioning of a given microbial community. Scientists with the U.S. Department of Energy … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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An Integrated Dataset to Understand Ecosystem Interaction
… revealed key metabolic pathways and metabolites associated with the tree’s stress response. Finally, using … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … metabolomic profiles — combined offers the global research community insights into how these trees adapt to different …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… 1, 2020, that all changed. Ray’s vigilant stewardship as JGI’s Operations Deputy has come to a close as this … home office (garage). There, standing at a safe distance, with proper face covering, was JGI’s Administrative Services … Michael Brandt (Operations Deputy), Horst Simon (Science Deputy), Jeff Blair (Chief Laboratory Counsel) and …
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Community standards and future opportunities for synthetic communities in plant–microbiota research
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Phylogenetic and phylogenomic overview of the Polyporales
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Overview of the MOSAiC expedition: Ecosystem
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Editorial overview: Energy biotechnology
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DOE JGI Interns Share Their Summer Experiences
This summer, the DOE JGI hosted 10 interns who came from a wide range of … DOE JGI’s efforts to promote diversity and inclusion in the sciences, among the interns were two undergraduate students … and math (STEM) fields. This summer, they worked with Zhong Wang’s and Tanja Woyke’s groups, respectively. …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group … develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software includes: gRNA-SeqRET , …
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Computationally Classifying Fungal Lifestyles
… on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in Mycology . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … livestock — specifically, from the methane-making microbes within their rumen. There is another climate-minded reason … map out genomes of rumen microbes. In 2018, through a JGI Community Science Program proposal that started six years …
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