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Refining the Process of Identifying Algae Biotechnology Candidates
… well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae in a container … As any good cook knows, recipes can be refined for best results, often by starting with identifying the right …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
In this short video, UC Merced undergraduate and graduate students … And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the … are a little bit stronger in computing, so I was kind of worried coming into the, the internship that maybe I …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this … from all three sections of the stratified water and determined that the microbial communities look very different …
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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … did so by analyzing this huge sample set specifically using results from tissue and condition-specific expression … in the nitrate-subjected plants but not the ammonium. These results highlight differences in plants’ response to nitrate …
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Extensive Genome-Wide Phylogenetic Discordance Is Due to Incomplete Lineage Sorting and Not Ongoing Introgression in a Rapidly Radiated Bryophyte Genus
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural … They’re too hard to work with.” And that made me more determined than ever to stick with fungi. And now I think we …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … sequencing protocols so that researchers could compare results across the varying sampling locations. …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … T Woyke (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology …
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Strain Engineering
The focus of this group, in recent years, has been to bring … The developed strains represent an additional phase of user-accessible project types, in which DNA-based … chromosomally integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for …
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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program …
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Identifying the Microbial Cleanup Crew at a Superfund Site
PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … microbial processes that support PCE biodegradation. The results demonstrate that it takes a (microbial) community to … are hazardous waste areas that require cleanup and long-term monitoring. The DOE has been similarly invested in …
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