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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from … ( magna cum laude ) PhD, Marine Biology, Scripps Institution of Oceanography …
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Scaling Up Existing Skill Sets
… Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer … to pursue a STEM career? I aspire to pursue a career in research and JGI has been the perfect experience in …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational … where he has engaged in collaborative, interdisciplinary research focused around developing foundational knowledge of …
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Axel Visel
… in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received … developed novel tools for large-scale in situ gene expression analysis in multicellular organisms. During his …
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2022 Progress Report
… seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab … leading integrative genome science user facility enabling researchers to solve the world’s evolving energy and …
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High-quality permanent draft genome sequence of Ensifer medicae strain WSM244, a microsymbiont isolated from Medicago polymorpha growing in alkaline soil
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives … Tübingen (Germany), Dr. Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research was the symbiont community of a gutless oligochaete …
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Webinar: PhycoCosm Tutorial
… about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would your Tree ever … comparison to other funding agencies. The JGI doesn’t fund research; we provide the resources for free. 8.  Q: What …
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A Sorghum Pangenome Opens More Doors to Discovery
… resequenced sorghum varieties, a resource for breeders and researchers to harness the traits that let this biomass … holds keys to drought and flood resilience, biomass production for fuels, and growth in poor soils. In addition to … around the world, much more genetic diversity exists.  Now, researchers have brought many reference genomes and …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and … National Laboratory (Berkeley Lab) describes it, JGI researchers have also collaborated to advance computing … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … yet much of it remains unknown. For more than a decade, researchers around the world have collaborated with the U.S. … culture collection of international renown, from which a researcher can easily procure a culture for follow up work, …
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Dan Rokhsar
… JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed … a Professor of Genetics, Genomics and Development after his research interests shifted from condensed matter physics to … biology, genomics and evolutionary biology. Dr. Rokhsar’s research is focused on understanding the origin, evolution, …
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