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Multiple microbial guilds mediate soil methane cycling along a wetland salinity gradient
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … PIs who drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated …
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A genetic linkage map for the ectomycorrhizal fungus Laccaria bicolor and its alignment to the whole‐genome sequence assemblies
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High Density Genetic Maps of Seashore Paspalum Using Genotyping-By-Sequencing and Their Relationship to The Sorghum Bicolor Genome
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Genetic mapping and prediction of flowering time and plant height in a maize Stiff Stalk MAGIC population
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Data Ecosystem
… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … to facilitate these efforts. Particular areas of emphasis will be the development of tools and … access and analyze data on scales ranging from single genes and individual genomes to metagenomes to systems-level …
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The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
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High resolution mapping reveals hotspots and sex-biased recombination in Populus trichocarpa.
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Jeremy Schmutz
… human chromosomes 5, 16, and 19. Following the completion of the human genome project in 2003, he developed … MdS Hossain, J. T., Lovell, J. T.., et al. 2023. JGI plant gene atlas: an updateable transcriptome resource to improve … mechanisms of climate adaptation in polyploid bioenergy switchgrass. Nature 590: 438-444. Mamidi, S et al. 2020. A …
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Environmental Genomics Group
… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … Ladau, J. et al. (2019)  Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology . Trends Microbiol. …
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Multiple origins, one evolutionary trajectory: gradual evolution characterizes distinct lineages of allotetraploid Brachypodium.
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural … After I got my undergraduate degree, which was in general biology, I joined the Peace Corps. And when I was …
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