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Jane Grimwood Named HudsonAlpha Genomics Chair
… Congratulations to Jane Grimwood, who has been appointed the … group for the JGI Plant Program . Her collaborations with the JGI began soon after the JGI was established to … University of Texas at Austin, HudsonAlpha, and the JGI. Building off this work, researchers at three DOE Bioenergy …
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome Institute, where he leads three groups focused on HTP DNA design and assembly, strain engineering and … positions at University of Florida and UCLA he has worked with a wide range of eukaryotic algae, archaea and bacteria …
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Natural Prodcast Episode 6: Marc Chevrette
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode 6 … that I wanted to include it. This is a conversation with Marc Chevrette. Marc is a postdoc in Jo Handelsman’s … really interesting – when you can begin to see these guys building better weapons against one another. That gives us …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… April marks both the 50th celebration of Earth Day on April … of California (UC), Merced graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. … an interactive public database for the research community. With more than 13 million BGCs in the catalog at the time of … Facility located at Berkeley Laboratory, built off past experience in developing a secondary metabolites portal …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and … book featuring polar bears in winter scenes that came with crayons in various shades of white. To researchers … for those snowflakes, or RNA virus sequences. Using this workflow, the team combed through more than 5,000 data sets …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. … complete genomes from varieties that diverged over a million years ago. The hallii variety thrives in desert … ( Panicum virgatum ) is a candidate bioenergy feedstock with a complex genome with multiple copies of its …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … wilder than ever. Imagine researchers exploring a dark room with a flashlight, only able to clearly identify what falls … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have both the machinery to make … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global … fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million families around the world whose livelihoods … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… This is excerpted from the full announcement “ Berkeley Lab Receives Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence … multi-terabyte datasets assembled for the first time with  MetaHipMer , taking advantage of scalable parallel …
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Three Join the JGI User Executive Committee
… (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest National … lead on PNNL’s Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological … JGI Community Science Program (CSP) proposals. He  brings experience representative of the interests of the JGI’s …
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