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Correlation-based network analysis combined with machine learning techniques highlight the role of the GABA shunt in Brachypodium sylvaticum freezing tolerance
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N-dependent dynamics of root growth and nitrate and ammonium uptake are altered by the bacterium Herbaspirillum seropedicae in the cereal model Brachypodium distachyon
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Building Wet and Dry Lab Skills
… the second year of Alabama A&M University students coming to the DOE Joint Genome Institute for research and … by a DOE training grant.  Building off the previous year’s project, undergraduate interns Tamyra Long and Zyiah Mikes … Functional Genomics Group to study the effects of  Brachypodium distachyon plant root exudates on the plant …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was … 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, and … DOE relevant cellulosic feedstocks. He provides scientific project management for the reference eukaryotic genomes …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… Innovative technology from this biomanufacturing … The collaboration between the JGI and the Foundry on this project highlights an  ongoing partnership that combines the … Through a Laboratory-Directed Research and Development project supported by Berkeley Lab, JGI and Foundry …
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DOE JGI Interns Share Their Summer Experiences
… This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of … worked with Zhong Wang while Karen Tolentino worked with Brachypodium researcher John Vogel. Other students hosted … worked with Zhong Wang’s group on an aspect of the same project assigned to Sharon and Cristhian; and, Lizhen Shi , …
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The CC–NB–LRR protein BSR1 from Brachypodium confers resistance to Barley stripe mosaic virus in gramineous plants by recognising TGB1 movement protein
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Plastome evolution in annual Brachypodium species reveals widespread heteroplasmy and chloroplast capture, lineage-specific codon usage bias, and low positive selection
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , … anything. The collaborative consortium behind the GROWdb project demonstrates not only how researchers can … awards DEB1840243, EAR1836768 and DEB1457794. Funding support also was provided from Colorado State …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This … and also made new friends while working on their summer projects. Watch the short video here to see what they had to … Mentors: Yi Zhai & John Vogel Project: Characterization of Brachypodium distachyon root transporters in …
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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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