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Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034T)
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Tanja Woyke
… assumed the Deputy Director of User Program position in 2021. In addition to her JGI appointment, she also holds an … at the Bigelow Laboratory for Ocean Sciences since 2012 and an Adjunct Professor at the University of California, Merced's School of Natural Sciences since 2015. Prospective users with specific questions regarding …
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Fungus Fuels Tree Growth
… and without an inoculation of the  M. elongata strain PM193 added to a diluted soil mixture, publishing  the results … Interactions . The results were striking. Adding PM193 caused poplar cuttings to grow about 30 percent larger by dry weight than without PM193  . By contrast, using a different endophytic fungus,  …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  … for investigating plant-microbe interactions. A final recent advance in CRAGE is the addition of CRISPR …
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Natural Prodcast Episode 5: Brad Moore
… pairs. It was not linear, like Streptomyces , but circular. 10% of the genome encoded natural product pathways. Dan: … Brad: Yeah, at that time, that was new, right? Like, my god 10% of the genome makes small molecules that have, you know, … of changed over the years. And I think maybe over the last 10 years, I’ve really become a fan of having postdocs, and …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of … efficient than glycolysis., Nature Chemical Biology , 2024 Dubinkina et al., A transcriptomic atlas of acute … Glycoside Phosphorylase That Degrades and Assembles Poly-β-1,3-GlcNAc, Completing the Suite of β-Linked GlcNAc …
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Draft genome sequence of Trichococcus flocculiformis DSM 2094T isolated from bulking sludge in Germany.
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A Sorghum Pangenome Opens More Doors to Discovery
… and bioenergy production. Together with resequencing of 1,984 cultivars and landraces, these data capture the … team looked at a gene that traces domestication, SHATTERING1 . This gene controls whether a plant keeps its seeds … improves global crop trait discovery.  Nature (2026). doi:10.1038/s41586-026-10229-9   …
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Scaling Up Existing Skill Sets
… to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their experiences below. … and truly an inspiration to me. Name: Brenda Yu Class Year: 1st year graduate student at Stanford University in the … to get a single line of code working and get the desired final output. Being successful in my computational efforts …
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Frederik Schulz
… Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His … Krinos et al. 2024. Time-series metagenomics reveals changing protistan … metagenomics. Nature Reviews Microbiology 20: 721 Volland, J.-M. et al. 2022. A centimeter-long bacterium at …
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Bacterial response to the 2021 Orange County, California, oil spill was episodic but subtle relative to natural fluctuations.
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Trent Northen
… Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to … and starvation modulate root exudation. Science Advances, 2024 10(1), Schadt, C., Martin, S., Carrell, A. et al. An … (AAAS), 2022&2023 Biosciences Inventor of the Year 2019 R&D100 Award 2016 Berkeley Lab Director Exceptional …
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