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Refining the Process of Identifying Algae Biotechnology Candidates
… well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae in a container with access to sunlight, water and carbon dioxide so they can grow, and then harvest for … the Department of Energy’s Office of Energy Efficiency and Renewable Energy (EERE) under Agreements NL0032355 and …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … their own food and generate oxygen as a byproduct. The abundance of oxygen shaped the evolution of life on Earth, … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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First Monoploid Reference Sequence of Sugarcane
… genome serves as a reference for the highly complex sugarcane genome . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many … was supported by the International Consortium for Sugarcane Biotechnology, as well as the South Green Bioinformatics …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … on comparative tools) 5.  Q: Is there any programmatic access to the portal? Or any data and metadata dumps … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version … 13 will become the current, and only, version of Phytozome accessible as an interactive website. Since May 2019, v12 … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … Laboratory (Berkeley Lab), to fill in these gaps of knowledge. In a study published November 11, 2022, in Cell … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, researchers could … It works as a two-part complex, along with a regulatory accessory protein and multiple metallocofactors. Given the … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE Office of Science …
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Simon Roux
… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of … research focused around developing foundational knowledge of viral diversity and virus-host interactions in …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the … in the JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the … from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the host organism can use whatever amino acids it has access to, which can be really weird and different, and … Episode Transcript … products chemist who works in a wide variety of marine organisms, including sponges, tunicates, cone snails, fungi, …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired … for bioinformatics internship opportunities in fields ranging from plant-microbe interactions to functional …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global … growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … is, ‘Think of these reference genomes as a surgeon’s knowledge, and of gene editing as a new tool. In order to …
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