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IMA genome-F18
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JGI Announces 2023 Community Science Program Awardees
Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was … Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the original methanogens were, but they were discovered by genome sequencing, which is a much less biased approach to … Program award.  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Rex Malmstrom
… genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … arbuscular mycorrhizal symbiosis. Nature Plants 10, 673–688 Vyshenska et al. 2023. A standardized quantitative … PNAS 113 (28), E4069-E4078 Bendall, M.L. et al. 2016. Genome-wide selective sweeps and gene-specific sweeps in …
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Gene Expression: From On-Off Switch to Dial
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Office of Scientific Research under Award No. FA9550-14-1-0089, the Camille and Henry Dreyfus Foundation, and the JGI … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … in this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal … build proteins. What Wint and her mentors discovered in the genomes helped to reinforce Charles Darwin’s “survival of …
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What Happens Underground Influences Global Nutrient Cycles
Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for … alga  Chlamydomonas reinhardtii , one of the JGI’s Flagship genomes. She and her colleagues have generated a … their FICUS proposal include assessing the distribution of genome-derived functional traits through the soil profile …
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Honey Bee Gut Microbiota Divvy Up Dinner
… including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department of Energy Joint Genome Institute.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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When “The Blob” Made It Hotter Under the Water
… were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Research (SCOR), the US Department of Energy (DOE) Joint Genome Institute, an Office of Science User Facility, …
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Simon Roux
… in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development … RNA virome reveals diverse clades of bacteriophages. Cell 185, 4023–4037. Coclet et al., 2023. Virus diversity and … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS Biology …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an …
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