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Virus Discoveries that Keep Getting Bigger
… from metagenomics to single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last … Nucleocytoviricota , these giant viruses boast larger genomes than many bacteria. Until recently, understanding of … culture-independent approaches to gain insight into the  genomes of giant viruses. In a new review, researchers from …
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Marine Microbe Contains Multitudes
… Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But SAR324 can be found throughout the … periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts (metagenomes, …
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems … Over the last year, the U.S. Department of Energy Joint Genome Institute has continued its journey to realize our … with more than 15,000 secondary users who made use of our data. We completed 39,870 projects in FY24 We generated 871 …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying … and implementing new technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining … Feb 17;50(1):kuad005. Otani H, Udwary DW, Mouncey NJ. Comparative and pangenomic analysis of the genus Streptomyces. Sci …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this summer through the Biotech Partners … the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. …
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New Research Sheds Light on Diversity in the Deep Sea
… vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too deep in … Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … contributed metagenomic sequencing to the study as well as  genome analysis, providing authors a more complete picture …
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Progress Reports: 2002–2020
… pdfs of previous Progress Reports from the Joint Genome Institute.  …
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Exploring Polymorphisms Created by Transposable Elements
… My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science … at Cornell University and scientists at the Joint Genome Institute, a DOE Office of Science User Facility was … while the DOE JGI team sequenced and annotated a host genome (Rm ATCC 52813) as part of the 1000 Fungal Genomes …
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The fungus that made itself at home
… dry rot Serpula lacrymans adapted to a new ecological habitat. The Science By comparing genetic information from … of Oslo scientists and including researchers at the Joint Genome Institute, a DOE Office of Science User Facility, compared the genomes of two strains of fungi Serpula lacrymans – var. …
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IMA genome-F18
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … The transcriptomes edit out these distractions. Combining genome and transcriptome information allowed the team to …
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