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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … oxygen, dwell in herbivore guts and help them digest their last leafy meal. In their evolutionary history, these fungi …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The …
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Training the Next Generation of Talent
New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced … a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the University of California, Merced to …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …
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IMA genome-F18
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JGI Announces 2023 Community Science Program Awardees
Congratulations to the proposers of the 19 proposals selected for … Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … gradient from the Fox permafrost tunnel near Fairbanks, Alaska. (Courtesy of Mary-Cathrine Leewis) Samples were …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth of poplar, a … elongata enjoys a dual lifestyle; it can thrive in the soil as a saprophyte, living off decaying organic matter, or as … partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities … Microbiology Resource Announcements … Education … Selected Publications … Awards and Honors …
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance computing resources, an upcoming …
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