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… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … The Science Since its launch 25 years ago, the  Genomes OnLine Database has matured from six projects on a … carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… of those shared by both humans and flowering plants). Its genome also contains hundreds of genes uniquely associated … of Chlamydomonas reinhardtii in 2003; then in 2007 the full genome was sequenced and published in the journal Science . … its effort to produce a full sequence of the Chlamydomonas genome in the early-2000s. She and other researchers came …

… interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants … temperature oscillations throughout the day. At the Joint Genome Institute, Dr. Cole’s research focus has been on …

…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science … of countering multiple attempts at virus infections. Their genomes include short DNA sequences that code for CRISPR … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes … Wang G et al. Chassis-Independent Recombinase-Assisted Genome Engineering Enables Rapid Activation of Biosynthetic …

… Biohub, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … and Verstraetearchaeota lineages. The archaeal genome was detected in samples collected by Stephen Quake’s … were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of them …

… a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more … the minimum amount of information for an uncultivated virus genome, including the source, methods of identification of the virus genome, and data quality. Go here to learn more about the …

… and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating genome sequences for members of the microbial world through … allow researchers to focus on specific microbes within metagenome samples and associate their sequences with their …

… has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … they called the Hungate1000, a catalog of 410 rumen microbe genomes. The project relied upon resources from laboratories … Sinead Leahy and the JGI’s Rekha Seshadri in this JGIota, a Genome Insider podcast minisode. To date it is the single …

… mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant populations varied with … technologies and bioinformatic tools have helped decode the genomes of tens of thousands of previously unknown and … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …

… year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a … oil plume from Deepwater Horizon oil spill led to a draft genome of the first deep-sea, oil-eating bacterium from a … researchers sequenced and assembled the first complete genome of an uncultured symbiont. The single cell was …

… researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly … 35 major evolutionary plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …