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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been … next 3 episodes are the story behind that giant assembly from Lake Mendota. In this episode: the software evolution …
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The Mobilome in the Mire
…   For years, researchers have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, … (JGI) as they talk about their recent work on a time series from Sweden’s Stordalen Mire. …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic … like one, is it still a duck? For a team led by researchers from The Ohio State University and the University of Michigan studying how virus infections cause significant … A portion of this research was performed under the …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where … efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in support …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and … Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … earned his PhD in Computational Biology and Bioinformatics from Yale University. …
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JGI Welcomes New UEC Members
… Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their access to technical capabilities JGI offers, as well as proposal review procedures and the …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at …
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What Happens To a Rainforest When You Dial Up Drought?
… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this annual gathering of leaders from diverse disciplines to highlight how they are …
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Crops as Tough as World Cup Turf
… In our warming world, we’ll need corn, sorghum and other crops to grow well in worse conditions: with more … Torrres have looked into traits that could transfer from grasses into other crops.  One grass they studied just …
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Building Wet and Dry Lab Skills
… Summer 2025 marked the second year of Alabama A&M University students coming to the DOE Joint … and Zyiah Mikes worked with mentors Yi Zhai and John Vogel from the Plant Functional Genomics Group to study …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director … directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … and animals by combining computational genome analysis, sequence-based genetic methods, and comparative …
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