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The More the Merrier: Making the Case for Plant Pan-genomes
… senior authors. “It offers us the possibility to explore genomically the whole complex of progenitors and descendant … of polyploidy.” Evaluating Polyploid Genomes in a Pan-genomic Context For the study, partly enabled by the JGI’s  … Aberystwyth University (UK); HudsonAlpha Institute for Biotechnology; University of Massachusetts Amherst; and, Tomsk …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… the microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the … Along with highlighting the viruses in a given sample, metagenomics shed light on another key aspect of viruses in the … As pioneers of this field, the JGI has leveraged metagenomics to boost understanding of environmental viruses. In …
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JGI@25: Building a Better Bean
Schmutz of the JGI and the HudsonAlpha Institute for Biotechnology; Phil McClean of North Dakota State University; … two points of origin in Central and South America.   “Technology was actually quite a bit different than it is … Phaseolus as a test model quite frequently for R&D in plant genomics, because it is an inbred dicot,” Schmutz explained, …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar … FICUS user program .  Q:  Is it possible to use these same techniques in drug discovery and synthesis from medicinal … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Boosting Small Molecule Production in Super “Soup”
… first report of their work, supported through the Emerging Technologies Opportunity Program at the U.S. Department of … Rapid Prototyping of Genes and Pathways” at the JGI Annual Genomics of Energy & Environment Meeting on September 1, … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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The Expanding Universe of Methane Metabolisms in Archaea
… enzymes.” Gribaldo will be speaking on “Exploration of Metagenomic Data to Understand the Diversity and Evolution of … in April, which immediately precedes the JGI’s 14th Annual Genomics of Energy & Environment Meeting. Registration for … genome, two metabolic pathways “Up to this point, most phylogenomic trees have relied on only one korarchaeotal …
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JGI User Executive Committee Expands
… genetics expertise and experience as a primarily fungal genomics user, he aims to help align JGI policies with … and practices that affect users and their access to technical capabilities JGI offers, as well as proposal …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… important addition to the synthetic biologist’s toolkit: a technique for  c hassis (or strain)-independent  r … select to be engineered. “Piloting access to this emerging technology with JGI users will enable us to assess CRAGE’s … as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Korea as well as a faculty affiliate in the Environmental Genomics and Systems Biology Division of Lawrence Berkeley …
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Pinning Down a Piece of Photosynthesis
… what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  … National Laboratory’s NSLS-II used multiple x-ray techniques combined with advanced computational simulations … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… while working to accommodate major changes in the technology implementation. As the JGI’s Walnut Creek … co-localization of JGI and KBase at the Integrative Genomics Building (IGB). Said Michael Brandt of Ray, “You … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Computationally Classifying Fungal Lifestyles
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