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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can browse the … harnessing algae for bioenergy and the greater bioeconomy. By bringing together publicly available genomic data on …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the … characterized from eucalypts, a group of 900 tree species belonging to the Myrtaceae (myrtle) family and containing the … of the E. grandis reference genome, an international effort by a team that included researchers at the DOE Joint Genome …
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Building Sphagnum Genomic Resources
… potential carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … and S. magellanicum. The draft genome for  S. fallax is already available on the  JGI plant portal Phytozome , and …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March … at Lawrence Berkeley National Laboratory, is located in one of those counties. The shelter-in-place order has since been … In this brief captioned video, JGI Chief Informatics Officer Kjiersten Fagnan reflects on the personal and …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … their essential nutrients, too.  This work is part of a long-term collaboration with the JGI Algal Program, which … CSP projects publicly available at the PhycoCosm portal . Byline: Menaka Wilhelm   …
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JGI on the 2020 Highly Cited Researchers List
… Researchers at the JGI! They are among those recognized by Clarivate Analytics as “true pioneers in their fields over the last decade, demonstrated by the production of multiple highly-cited papers that rank in the top 1% by … by the JGI through the  Community Science Program, and already available on the JGI’s  Integrated Microbial Genomes & …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become … back in 2014.  Several components of that codebase are no longer supported, and there are now much more powerful and …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… in science, technology, and diversity/inclusion by the annual  HPCwire Readers’ and Editors’ Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire … Chief Informatics Officer  Kjiersten Fagnan touted the long-standing collaboration between JGI and the ExaBiome …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of actinobacteria … its Secondary Metabolites research group . That group, led by JGI Director Nigel Mouncey, has launched its  Secondary … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI announces first round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel … under our Community Science Program.  Below find a list of the first 10 researchers accepted for 2023. Proposals are …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … a UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors of the  recent … secrets. This work builds upon JGI-supported research led by Gmitter and JGI’s Daniel Rokhsar, published over the last …
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Soil virus offers insight into maintaining microorganisms
… that may promote soil health. The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … This work was supported by the Department of Energy (DOE) Office of Biological and Environmental …
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