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Covariation of hot spring geochemistry with microbial genomic diversity, function, and evolution
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Genomes OnLine Database (GOLD) v.10: new features and updates
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Genomic prediction of switchgrass winter survivorship across diverse lowland populations
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Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
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Comparative genomics of Mollicutes-related endobacteria supports a late invasion into Mucoromycota fungi
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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
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Insights into convergent evolution of cosexuality in liverworts from the Marchantia quadrata genome
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Targeted genetic manipulation and yeast-like evolutionary genomics in the green alga Auxenochlorella
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JGI Workshop at SIMB NP Meeting
… Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their biosynthetic logics to be understood, accessing these untapped metabolic capabilities is often tedious … a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from …
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the … CalTeach initiative. During their time at the Joint Genome Institute, they interacted with interns from other …
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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi … National Laboratory and the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … and archaea, actively engaging with the fungi — highlighting the hyphosphere as an even more complex and dynamic …
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JGI Announces 2025 New Investigator Portfolio
… Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang Li; … You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel … such as metatranscriptomics and environmental DNA sequencing to explore microbial and plant interactions …
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