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… of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Lawrence Berkeley … to adapt to changing environments. It also sheds light on why the rapid injection of mutations in a particular gene … all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and is the head …

… environmental or biological samples (like cell media or lake water) without doing a metabolite extraction? Or are … 10.1021/acschembio.8b01107. Epub 2019 Apr 4. Q:  Any advice on normalizing metabolomic data from a whole microbial … transcriptome analysis and 8 replicates for metabolomics. Why is this? A:  We did a pilot experiment with the JGI to …

… of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … genomic biodiversity. Using publicly available genome sequence data generated over the past three decades, their … group. “Turns out that despite all the genomes we've sequenced, we've only scratched the surface.” The study, …

… (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass  genome using samples … at three DOE Bioenergy Research Centers (BRCs)—the  Great Lakes Bioenergy Research Center (GLBRC) , the  Center for … many parts of the country also helped the team understand why some switchgrass plants from the Northeast have traits …

… gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …

… is particularly interested in understanding how, when and why microbes decide to produce which metabolites. … BS, …

… it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, cumulatively called lignocellulose, … Centers, the Joint BioEnergy Institute and the Great Lakes Bioenergy Research Center. O’Malley is also affiliated … Research of the U.S. Department of Energy Great Lakes Bioenergy Research Center (GLBRC, …

… fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a … in the forest. White rot can break down the cellulose, hemicellulose, and lignin in plant cell walls, while brown rot … relationships outside of the root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing …

… to provide a cataloged and curated culture and genome sequence resource of rumen microorganisms . Thanks to the … in themselves. For example, a few organisms originally sequenced in the Hungate1000 collection harbor enzymes that … rumen microbes are awesome and this is just another example why.” …