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Programs & Platform Leads
… that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, …
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Genome sequence of the Wenxinia marina type strain (DSM 24838T), a representative of the Roseobacter group isolated from oilfield sediments
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… so there was quite a bit of resistance to use resources to sequence it,” Patrinos said. After many more meetings and … mostly focused around how to best work together to achieve great success. “For the most difficult challenges, no one … with the JGI’s research portfolio, he admitted that boiling that portfolio’s impact down into a succinct message …
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Decoding Yellowstone’s Microbial Mats
Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered … new technologies, and made a few discoveries about the microbial mat denizens.  …
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The Expanding Universe of Methane Metabolisms in Archaea
The newly described Korarchaeota were identified in thermal sediments from Washburn Hot Springs in Yellowstone National Park. This large geothermal … for the anaerobic oxidation of methane, a subject of great interest in environmental and evolutionary …
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Supercharging SIP in the Fungal Hyphosphere
… automated aspects of a commonly-used process for studying microbial communities, with results published in the  November 2022 … DNA of specific microbes who consume the labeled food or water. Later, their DNA can be tested for the isotope, which …
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Complete Genome Sequence of Desulfurococcus fermentans, a Hyperthermophilic Cellulolytic Crenarchaeon Isolated from a Freshwater Hot Spring in Kamchatka, Russia
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A Community Resource for Secondary Metabolite Researchers
… time of publication, it is the largest repository of BGC sequence data from over 1.3 million publicly available … agriculture. This comprehensive public repository of BGC sequences that come pre-annotated using multiple commonly … a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as …
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A toolkit for microbial community editing
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JGI@25: Solving the Mystery of the Missing Oil
… that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. Within days of the Deepwater Horizon oil rig explosion that dumped nearly five … also helped track and characterize the shifting waves of microbial communities involved in removing different …
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Cataloging the Microbes that Manage the Health of River Systems
… provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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Relationship between Abundance and Specific Activity of Bacterioplankton in Open Ocean Surface Waters
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