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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
School in Palm Beach County, Florida. The class sought to apply the latest molecular techniques to learn more about … provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the journal  … team provided guidance and encouragement to submit a proposal, which was approved as a Director’s Science project …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… other oceans. That zinc turns out to be extremely important for polar phytoplankton.  After peering into the function … at the University of East Anglia, leads this effort to understand what makes polar photosynthesizers tick. … (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this collaboration, in 2017, they published …
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Better Genome Editing for Bioenergy
… tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … , a team of researchers likewise honed their tool before felling their research problem: at a genetic level, how … work was supported by DOE Joint Genome Institute grant  CSP-503076 (IW, HA, and MB) and NSF  1706545 (IW). HA and JW …
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Jeremy Schmutz
Genome Institute dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for … Institute and the collaborative projects funded through the CSP program. In addition to continuing to develop strategies …
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JGI at the AGU Fall Meeting
… hosts sessions in New Orleans and online. Register for the meeting here. Here are some sessions of interest … in accelerating research and tips for submitting successful proposals: Collaborate With a U.S. DOE User Facility: Learn … III: Pamela Weisenhorn, KBase at Argonne (lightning talk): “Applying Data Standards and Reproducible Workflows To …
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A Complex Confection Decoded: Sugarcane Reference Genome
… world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar R570 has been  published in  … on the JGI plant data portal,  Phytozome .   … The work (proposal: https://doi.org/10.46936/10.25585/60001084 and …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted … chemical, where ordinary Carbon-12 atoms are swapped for the heavier, non-radioactive isotope Carbon-13, … can request quantitative SIP analysis as a capability in proposal calls to the U.S. Department of Energy (DOE) Joint …
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Ancient Algae Reveal Secrets of Plant Evolution
… of how plants adapted to terrestrial life paves the way for innovations in sustainable agriculture and clean energy. … the Joint Genome Institute Community Science Program (CSP), the United States Department of Agriculture (USDA) … Fund (FWF) project 10.55776/P34181 to A.H. The work (proposal: 10.46936/10.25585/60001088) conducted by the US …
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Triggering Morel Fruiting
Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest … San Francisco State University, developed a technique to successfully obtain fruiting bodies of morel in walk-in … black morels (e.g., M. importuna Kuo, O’Donnell & Volk) to successfully fruit in common farmland soils. Compared to the …
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JGI & KBase at PAG XXVII
JGI about collaborative science opportunities. Learn how to apply for a project with the JGI Community Science Program, and … toward integrative biology. Researchers who are applying genomic sequence information to BER-funded …
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Digging into Microbial Ecosystems Deep Underground
… about the microbial communities deep underground, and before the pandemic, they took the JGI on a sampling field … Amundson in the journal Microbiome . The work builds off a proposal approved through a collaborative science initiative called Facilities Integrating Collaborations for User Science (FICUS) . Through FICUS, the researchers …
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