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JGI@25: From Life at the Extremes to Editing Genomes
… science that will help solve energy and environmental challenges. Congratulations to Jennifer Doudna of the … led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection … doi: 10.1016/j.molcel.2020.06.022. Wright AV et al. A Functional Mini-Integrase in a Two-Protein-type V-C CRISPR …
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JGI@25: Using Team Science to Build Communities Around Data
… science that will help solve energy and environmental challenges. The 1KFG project represents affiliations at over … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would complement these …
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Functional genomic screening in Komagataella phaffii enabled by high-activity CRISPR-Cas9 library
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Covariation of hot spring geochemistry with microbial genomic diversity, function, and evolution
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Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria
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Finding the Fermenters
… had found other ways to produce energy, using a process called fermentation. To better understand the range of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … function of these two isolates. The combined taxonomic and functional annotations were used to predict the final end …
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Institutional User Agreements
…   All User researchers must have their home/employing institution sign a JGI Non-Proprietary User Agreement and … documents can be emailed to the CO.  The CO will sign on behalf of LBNL, and will notify all parties when work may … the Bilateral DOE Laboratory Utilization Agreement specifically for the JGI’s DNA Synthesis Program has been …
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Fungal Friends or Foes in Plant Roots
… work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that contributed … of the key community participants and enabling future metagenomics studies.   … The sequencing project was funded by … the framework of CSP 1974 “1KFG: Deep-sequencing of ecologically relevant Dikaria”. This work was supported by funds to …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established and … talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your …
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Cynipid wasps systematically reprogram host metabolism and restructure cell walls in developing galls
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Applying Viral Genomics Expertise to Understanding the Human Virome
… their expertise in developing and managing public viral genomics resources such as analytical tools and data … “ Advanced analytics for uncovering virus dynamics and functional potential ," is among the five focused on tool development. Specifically, the goal of this work is to develop tools, curated …
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Integrative genomic mining for enzyme function to enable engineering of a non-natural biosynthetic pathway
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