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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied to … effort, researchers have identified a protein in soil viruses that may promote soil health. The work was … and annotation of all publicly available genomes in three domains of life.  Using the IMG suite, JGI retrieved 142 of …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … According to the Environmental Protection Agency , methane gas warms the atmosphere as much as 25 times more quickly …
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Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship opportunities through working directly with specific … The JGI and UC Merced have had a long-standing internship partnership that started in the summer of 2014. … Modeled on the JGI-UC Merced internship program, a similar collaboration with AAMU …
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Integrating Experimentation with Data
…   Registration for this meeting has closed           Registration fees:       …         General attendees: $500     Students: $200      Postdocs: $250     Industry: $700    Thanks for joining the … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science …
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High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1T Isolated from Great Boiling Spring, Nevada
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual … rhizosphere but also abundant everywhere in the earth’s soils. While she admits that it “0.25% doesn’t seem like a … talk,” she concluded, “is that as we leverage these amazing technologies that the JGI has to identify and sequence who’s …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of … is also focused on single-cell and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel … plant and fungal single-cell and spatial transcriptomic technologies, as described in the JGI Strategic Plan. The …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science … This cycle suggests a reliance on photosynthesis to maintain nutrient cycling that evolved separately from other … This work was supported by the Australian Research Council …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a … wasn’t quite accurate, and maybe anaerobic fungi living in soils or the guts of livestock were more capable than …
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Decoding Yellowstone’s Microbial Mats
… Life as we know it wouldn’t exist without cyanobacteria; they began oxygenating Earth over two billion years ago. A team of researchers set … Along the way, they’ve encountered surprises, adopted new technologies, and made a few discoveries about the microbial …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI. … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable … 1) Complete Sample Metadata form Sample metadata is collected via spreadsheet or entered …
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