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Introducing New Members of the JGI User Executive Committee
… serving on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons … to serve on the UEC. For microbial ecologist Gilbert at the University of California (UC) San Diego, being on the UEC is … (CNRS) in October and maintains a lab at Michigan State University. She aims to help overcome common user …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … said Thomas Mock, marine microbiologist at the University of East Anglia (UEA, UK) and senior author of the … regard,” said Andy Allen, biological oceanographer at the University of California, San Diego and the Scripps …
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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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Simon Roux
… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS …
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SIPs with Standards
SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to … This episode, Rex Malmstrom (JGI), and Roli Wilhelm (Purdue University), share a few different ways they're working to … more reusable, and more insightful, for the future of studying microbial communities.   …
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Genome Sequence of Polycyclovorans algicola Strain TG408, an Obligate Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  … to S. Cheng and from the URPP Evolution in Action of the University of Zurich, grants from the Swiss National Science … Antoine Claraz Foundation and the Forschgungskredit of the University of Zurich (FK-20-089) to P.S. …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … is part of another project led by Owen White at the University of Maryland, Baltimore. Both projects will build … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , …
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What Happens Underground Influences Global Nutrient Cycles
… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … and bioproducts. For example, Sabeeha Merchant of the University of California, Berkeley studies the alga  … interactions focus area comes from Malak Tfaily of the University of Arizona. Her team aims to use data from an …
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New Research Sheds Light on Diversity in the Deep Sea
… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … that live there.  Researchers from Portland State University and the University of Wisconsin-Madison collected … at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both …   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days … Karolina Heyduk, an evolutionary plant biologist at the University of Hawai’i at Mānoa. I recently caught up with …
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JGI-KBase Panel at SACNAS
Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific … students (and their mentors) how to begin establishing a professional presence through getting credit for any scientific contribution they make, whether as part of a course or internship, and before ever publishing a …
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